It doesn't really work that way, for two reasons.
1. If the stickers are thin enough, it doesn't really make a difference. They're thinner than the rivets that keep the metal plates together.
2. Even if they did, small irregularities in something's surface sometimes reduces air friction due to the formation of air pockets that act as a lubricant. Think a golf ball.
Point 1 being way more important than 2. Because if point 2 doesn't happen (it probably doesn't), by using paint they'd be saving a negligible amount of fuel, but increasing maintenance costs considerably.