Clean Vocals

Some of Temnozor'
In The Woods (Omnio)
Warning
Some of Primordial
Knell (ukr)
Beyond Twilight (prog)
Gamma Ray
Manticora
Communic
Театр Теней
Circus Maximus
 
Not all of them are "modern", some are defunct, but all feature clean vocals:
Fates Warning
Psychotic Waltz
Shadow Gallery
Sieges Even
The Gathering - "Mandylion", "Nighttime Birds" (anything afterwards isn't metal anymore, though I still like it)
Heathen
Nemesea - "Mana"
Midnattsol
Ava Inferi
Dreams Of Sanity
Zed Yago
Mordred
 
I love Sieges Even. I don't really consider them metal, but they are an awesome avant-garde/prog band. The new album is great, but The Art of Navigating By the Stars is still my favorite.
 
Finally as for other flamenco metal try the following, Breed 77, Medina Azahara, Marc Rizzo, Diablo Swing Orchestra.

Ah I forgot about that 1 flamenco metal song that DSO had. Gotta check out these other bands though.
 
Haven't heard the rest of his recs, but Flametal is a great place to start. Make sure to listen to the remastered album though, it's far superior to the first recording IMO.